Perform simpler and faster analysis for both infectious and non-infectious microorganisms through a efficient and customized bioinformatics pipelines.
Platform for analysis and identification of microorganisms.
Targeted detection of
bacteria and fungi
Register an analysis routine specifying basic data, such as the desired bioinformatics pipeline, sequencing platform and kit used in the process.
In the upload step, upload the NGS sequencing raw files of the clinical samples. Varmetagen accepts the main formats (FASTQ, FASTQ.GZ and BAM).
After the processing is done, it’s possible to evaluate quality metrics and the diversity of microorganisms present in each sample individually. Thus, ensuring more security and practicality in the analysis (interpretation of results for generating reports).
The SarsOmics project, funded by CNPq, emerged at the beginning of the pandemic and performs the sequencing of the COVID-19 virus, SARS-CoV-2, in addition to studying co-infections with other viruses, bacteria and fungi in the respiratory tract of patients with COVID-19.
A huge amount of NGS data has been generated by the project, and the practicality and scalability of Varsmetagen has helped in the process of analysis and interpretation of these results.